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- 11:12, 18 July 2023 Installation dev (hist | edit) [2,135 bytes] Igor (talk | contribs) (Created page with "====== A note to the developers ====== To add a new algorithm one has to do two things: **(a)** Write a class that implements the ITrackingAlgorithm interface (javadoc here: http://homer.zpr.fer.hr/bactimas/doku.php?id=javadoc:javadoc). These are the summaries of the requested methods: void beforeBatch(int firstFrameNo) Invoked before processing batch. void beforeStep(int frameNo) Invoked before every step(). java.lang.String g...")
- 11:11, 18 July 2023 Database (hist | edit) [34,453 bytes] Igor (talk | contribs) (Created page with "== BactImAs Database == In principle, you can use any database you like as long as you can connect (have a) JDBC driver for that database. For the time being, we're using sqlite database, since it is light, portable, multi-platform and easy to install. Below, you'll find both sqlite create database script, and Microsoft SQL Server database script. Starting from those, it's easy to adjust the script for any SQL database server. Note that you should not bother with cr...")
- 11:01, 18 July 2023 JavaDoc (hist | edit) [73 bytes] Igor (talk | contribs) (Created page with "{{url>https://homer.zpr.fer.hr/bactimas_javadoc/index.html 98%, 1024px}}")
- 10:56, 18 July 2023 Video tutorial (hist | edit) [316 bytes] Igor (talk | contribs) (Created page with "= Video Tutorial = == 1. BactImAs structure and Phase 1 == Video explaining BactImAs structure and where to store experiment images and databases. <youtube>B_A87dSbhP8</youtube> == 2. New experiment == Video explaining how to define new experiment, and set the initial cell ROIs. <youtube>fEv40wU9x_Y</youtube>")
- 10:54, 18 July 2023 User manual (hist | edit) [24,659 bytes] Igor (talk | contribs) (Created page with "====== BactImAs User Manual ====== ===== 1. BactImAs GUI ===== Image below shows the BactImAs GUI. GUI consists of three main parts: * R/G/B channel images, scrollable image panes showing every second frame of the experiment * Frame/cell tree on the right showing all frames and cells/ROIs * Status window showing messages from...")
- 10:50, 18 July 2023 Installation (hist | edit) [4,788 bytes] Igor (talk | contribs) (Created page with "===== BactImAs Installation Guide ===== ==== 1. BactImAs releases (download) ==== === Release 0.7.1 === * Binaries (ready to run) * BactImAs(6 MB) * Source code (for the developers) * Hosted at Github: https://github.com/mekterovic/bactimas ==== 2. Installation ==== BactImAs is a multi-platform application written in Java which uses sqlite dat...")