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B

b - Variable in class signalprocesser.voronoi.eventqueue.VSiteEvent
 
Bacteria - Class in bactimas.db.beans
 
Bacteria(int, int, String) - Constructor for class bactimas.db.beans.Bacteria
 
Bacteria() - Constructor for class bactimas.db.beans.Bacteria
 
BacteriaKeyValue - Class in bactimas.gui.frametree
 
BacteriaKeyValue(String, double) - Constructor for class bactimas.gui.frametree.BacteriaKeyValue
 
BacteriaMeasurement - Class in bactimas.db.beans
 
BacteriaMeasurement(int, int, int, double, String, String, int, int) - Constructor for class bactimas.db.beans.BacteriaMeasurement
 
BacteriaMeasurement(int, int, int, double, int, int) - Constructor for class bactimas.db.beans.BacteriaMeasurement
 
BacteriaNode - Class in bactimas.gui.frametree
 
BacteriaNode(FrameNode, Bacteria) - Constructor for class bactimas.gui.frametree.BacteriaNode
 
bacteriaSelected(BacteriaNode) - Method in interface bactimas.gui.events.IBacteriaListener
 
bacteriaSetROI(BacteriaNode, Roi) - Method in interface bactimas.gui.events.IBacteriaListener
 
BacteriaSplit - Class in bactimas.db.beans
 
BacteriaSplit(int, String, String, String) - Constructor for class bactimas.db.beans.BacteriaSplit
 
BacteriaState - Class in bactimas.db.beans
 
BacteriaState(int, String, String) - Constructor for class bactimas.db.beans.BacteriaState
 
BacteriaStateChange - Class in bactimas.db.beans
 
BacteriaStateChange(int, int, int, String, String, String) - Constructor for class bactimas.db.beans.BacteriaStateChange
 
BactImAs - Class in plugins.mekterovic.bactimas
 
BactImAs() - Constructor for class plugins.mekterovic.bactimas.BactImAs
 
bactimas.alg - package bactimas.alg
 
bactimas.algorithms - package bactimas.algorithms
 
bactimas.bintree - package bactimas.bintree
 
bactimas.datamodel - package bactimas.datamodel
 
bactimas.db - package bactimas.db
 
bactimas.db.beans - package bactimas.db.beans
 
bactimas.gui - package bactimas.gui
 
bactimas.gui.events - package bactimas.gui.events
 
bactimas.gui.frametree - package bactimas.gui.frametree
 
bactimas.gui.sql - package bactimas.gui.sql
 
bactimas.util - package bactimas.util
 
BeanToCsv<T> - Class in au.com.bytecode.opencsv.bean
Allows to export Java beans content to a new CSV spreadsheet file.
BeanToCsv() - Constructor for class au.com.bytecode.opencsv.bean.BeanToCsv
 
beforeBatch(int) - Method in interface bactimas.alg.ITrackingAlgorithm
Invoked before processing batch.
Eg, say a user wants to process 10 frames:
beforeBatch is called once before
beforeStep is called 10 times
Typically used to show a dialog and acquire algorithm parameters.
beforeBatch(int) - Method in class bactimas.algorithms.CopyAndAdjustAlgorithm
 
beforeBatchNotSafe(int) - Method in class bactimas.algorithms.CopyAndAdjustAlgorithm
 
beforeStep(int) - Method in interface bactimas.alg.ITrackingAlgorithm
Invoked before every step()
beforeStep(int) - Method in class bactimas.algorithms.CopyAndAdjustAlgorithm
 
beginAlgorithm(Collection<VPoint>) - Method in class signalprocesser.voronoi.representation.boundaryproblem.BoundaryProblemRepresentation
 
beginAlgorithm(Collection<VPoint>) - Method in class signalprocesser.voronoi.representation.boundaryproblem.voronoicell.VoronoiCellRepresentation
 
beginAlgorithm(Collection<VPoint>) - Method in interface signalprocesser.voronoi.representation.RepresentationInterface
 
beginAlgorithm(Collection<VPoint>) - Method in class signalprocesser.voronoi.representation.simpletriangulation.SimpleTriangulationRepresentation
 
beginAlgorithm(Collection<VPoint>) - Method in class signalprocesser.voronoi.representation.triangulation.TriangulationRepresentation
 
beginAlgorithm(Collection<VPoint>) - Method in class signalprocesser.voronoi.representation.voronoicell.VoronoiCellRepresentation
 
beginAlgorithm(Collection<VPoint>) - Method in class signalprocesser.voronoi.VoronoiTest.TestRepresentationWrapper
 
beginExperiment(String, String, String, String, int, BigDecimal, BigDecimal, BigDecimal) - Static method in class bactimas.datamodel.CurrentExperiment
Loads the experiment with the given name or creates a new one.
beginExperiment(String, String, String, String, int, BigDecimal, BigDecimal, BigDecimal) - Static method in class bactimas.db.DALService
Loads the experiment with the given name or creates a new one.
BestVoronoiCells - Class in signalprocesser.voronoi.representation.voronoicell
 
BestVoronoiCells(int) - Constructor for class signalprocesser.voronoi.representation.voronoicell.BestVoronoiCells
 
BestVoronoiCells(int, Collection<VPoint>) - Constructor for class signalprocesser.voronoi.representation.voronoicell.BestVoronoiCells
 
BoundaryProblemRepresentation - Class in signalprocesser.voronoi.representation.boundaryproblem
 
BoundaryProblemRepresentation() - Constructor for class signalprocesser.voronoi.representation.boundaryproblem.BoundaryProblemRepresentation
 
BOX_FONT - Static variable in class signalprocesser.voronoi.statusstructure.binarysearchtreeimpl.debug.DebugTree
 
BOX_HEIGHT - Static variable in class signalprocesser.voronoi.statusstructure.binarysearchtreeimpl.debug.DebugTree
 
BOX_WIDTH - Static variable in class signalprocesser.voronoi.statusstructure.binarysearchtreeimpl.debug.DebugTree
 
BridgeToRoiManager - Class in ij.plugin.frame
 
BridgeToRoiManager() - Constructor for class ij.plugin.frame.BridgeToRoiManager
 
BSTStatusStructure - Class in signalprocesser.voronoi.statusstructure.binarysearchtreeimpl
 
BSTStatusStructure() - Constructor for class signalprocesser.voronoi.statusstructure.binarysearchtreeimpl.BSTStatusStructure
 
BTreeElement - Class in bactimas.db.beans
 
BTreeElement(int, int, String, float, float) - Constructor for class bactimas.db.beans.BTreeElement
 
BTreeEvent - Class in bactimas.bintree
 
BTreeEvent(int, String) - Constructor for class bactimas.bintree.BTreeEvent
 
BTreeEventListener - Interface in bactimas.bintree
 
BTreeStateChange - Class in bactimas.bintree
 
BTreeStateChange(int, String, String) - Constructor for class bactimas.bintree.BTreeStateChange
 
BTreeVisualizationPane - Class in bactimas.bintree
 
BTreeVisualizationPane(Node, int, int, LinkedList<Color>, double, double, int, int, double, double, boolean, boolean, LinkedList<BTreeEvent>, String, String, int) - Constructor for class bactimas.bintree.BTreeVisualizationPane
 
buildDirectory(File) - Static method in class bactimas.util.S
 
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