- c - Variable in class signalprocesser.voronoi.eventqueue.VSiteEvent
-
- calcParabolaConstants(double) - Method in class signalprocesser.voronoi.eventqueue.VSiteEvent
-
- calculateAreaOfShape(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.VoronoiShared
-
- calculateAreaOfShape(Shape) - Static method in class signalprocesser.voronoi.VoronoiShared
-
- calculateAreaOfShape(PathIterator) - Static method in class signalprocesser.voronoi.VoronoiShared
-
- calculateAreaOfTriangle(double, double, double) - Static method in class signalprocesser.voronoi.representation.boundaryproblem.voronoicell.VVoronoiCell
-
- calculateAreaOfTriangle(double, double, double) - Static method in class signalprocesser.voronoi.representation.voronoicell.VVoronoiCell
-
- calculateAveragePoint() - Method in class signalprocesser.voronoi.representation.triangulation.VCluster
-
- calculateCenter(VSiteEvent, VSiteEvent, VSiteEvent) - Static method in class signalprocesser.voronoi.VoronoiShared
-
- calculateCutOff(TriangulationRepresentation) - Method in class signalprocesser.voronoi.representation.triangulation.TriangulationRepresentation.CalcCutOff
-
- calculateLengthCutoff() - Method in class signalprocesser.voronoi.representation.triangulation.TriangulationRepresentation
-
- calculatePerimeterOfShape(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.VoronoiShared
-
- captureHeader(CSVReader) - Method in class au.com.bytecode.opencsv.bean.ColumnPositionMappingStrategy
-
- captureHeader(CSVReader) - Method in class au.com.bytecode.opencsv.bean.HeaderColumnNameMappingStrategy
-
- captureHeader(CSVReader) - Method in interface au.com.bytecode.opencsv.bean.MappingStrategy
-
Implementation of this method can grab the header line before parsing begins to use to map columns
to bean properties.
- CDATA_TYPE - Static variable in class bactimas.bintree.DOM
-
- checkError() - Method in class au.com.bytecode.opencsv.CSVWriter
-
Checks to see if the there has been an error in the printstream.
- checkInitConfAndDataFolder() - Static method in class bactimas.util.S
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in class signalprocesser.voronoi.representation.boundaryproblem.BoundaryProblemRepresentation
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in class signalprocesser.voronoi.representation.boundaryproblem.voronoicell.VoronoiCellRepresentation
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in interface signalprocesser.voronoi.representation.RepresentationInterface
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in class signalprocesser.voronoi.representation.simpletriangulation.SimpleTriangulationRepresentation
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in class signalprocesser.voronoi.representation.triangulation.TriangulationRepresentation
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in class signalprocesser.voronoi.representation.voronoicell.VoronoiCellRepresentation
-
- circleEvent(VLinkedNode, VLinkedNode, VLinkedNode, int, int) - Method in class signalprocesser.voronoi.VoronoiTest.TestRepresentationWrapper
-
- clear() - Method in class bactimas.gui.frametree.FrameTree
-
Remove all nodes except the root node.
- clearConnectedVertexs() - Method in class signalprocesser.voronoi.representation.boundaryproblem.VVertex
-
- clearEdges() - Method in class signalprocesser.voronoi.representation.triangulation.VVertex
-
- CLOBBUFFERSIZE - Static variable in class au.com.bytecode.opencsv.ResultSetHelperService
-
- cloneCollection(Collection) - Static method in class signalprocesser.shared.Reflect
-
- cloneCollection(Collection, int) - Static method in class signalprocesser.shared.Reflect
-
- cloneLeafNode() - Method in class signalprocesser.voronoi.statusstructure.binarysearchtreeimpl.VLeafNode
-
- cloneLinkedNode() - Method in class signalprocesser.voronoi.statusstructure.VLinkedNode
-
- cloneObject(Object) - Static method in class signalprocesser.shared.Reflect
-
- cloneObject(Object, int) - Static method in class signalprocesser.shared.Reflect
-
- cloneVector(Vector) - Static method in class signalprocesser.shared.Reflect
-
- cloneVector(Vector, int) - Static method in class signalprocesser.shared.Reflect
-
- close() - Method in class au.com.bytecode.opencsv.CSVReader
-
Closes the underlying reader.
- close() - Method in class au.com.bytecode.opencsv.CSVWriter
-
Close the underlying stream writer flushing any buffered content.
- closeResultsWindow() - Static method in class bactimas.datamodel.CurrentExperiment
-
- colToValue(Color) - Static method in class bactimas.alg.MovieProcessor
-
- ColumnPositionMappingStrategy<T> - Class in au.com.bytecode.opencsv.bean
-
Copyright 2007 Kyle Miller.
- ColumnPositionMappingStrategy() - Constructor for class au.com.bytecode.opencsv.bean.ColumnPositionMappingStrategy
-
- COMMENT_TYPE - Static variable in class bactimas.bintree.DOM
-
- compareTo(Object) - Method in class bactimas.alg.ForcedPoint
-
- compareTo(Object) - Method in class bactimas.alg.PointSum
-
- compareTo(Object) - Method in class bactimas.bintree.Node.TimeIntensity
-
- compareTo(Object) - Method in class bactimas.bintree.Node.TimeSize
-
- ComputerRoiNode - Class in bactimas.gui.frametree
-
- ComputerRoiNode(BacteriaNode) - Constructor for class bactimas.gui.frametree.ComputerRoiNode
-
- concat(String[]...) - Static method in class bactimas.util.S
-
- connect(Node) - Method in class bactimas.bintree.Node
-
- ConnectionManager - Class in bactimas.db
-
- ConnectionManager() - Constructor for class bactimas.db.ConnectionManager
-
- ControlPanel - Class in bactimas.gui
-
- ControlPanel(TitledFrame) - Constructor for class bactimas.gui.ControlPanel
-
- convertPointsToBoundaryProblemPoints(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- convertPointsToSimpleTriangulationPoints(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- convertPointsToTriangulationPoints(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- convertPointsToVoronoiCellPoints(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- convertPointsToVPoints(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- CopyAndAdjustAlgorithm - Class in bactimas.algorithms
-
- CopyAndAdjustAlgorithm() - Constructor for class bactimas.algorithms.CopyAndAdjustAlgorithm
-
- CopyAndAdjustNoLogAlgorithm - Class in bactimas.algorithms
-
- CopyAndAdjustNoLogAlgorithm() - Constructor for class bactimas.algorithms.CopyAndAdjustNoLogAlgorithm
-
- copyInputStream(InputStream, OutputStream) - Static method in class bactimas.util.S
-
- CountryData - Class in signalprocesser.voronoi.tools
-
- CountryData() - Constructor for class signalprocesser.voronoi.tools.CountryData
-
- CountryListModel - Class in signalprocesser.voronoi.tools
-
- CountryListModel(JComboBox<?>, ArrayList<String>) - Constructor for class signalprocesser.voronoi.tools.CountryListModel
-
- CountryListModel.CountryListRender - Class in signalprocesser.voronoi.tools
-
- CountryListModel.CountryListRender() - Constructor for class signalprocesser.voronoi.tools.CountryListModel.CountryListRender
-
- createArea(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.shapegeneration.ShapeGeneration
-
- createBean() - Method in class au.com.bytecode.opencsv.bean.HeaderColumnNameMappingStrategy
-
- createBean() - Method in interface au.com.bytecode.opencsv.bean.MappingStrategy
-
- createBoundaryProblemRepresentation() - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- createDefaultStatusStructure() - Static method in class signalprocesser.voronoi.statusstructure.AbstractStatusStructure
-
- createPoint(int, int) - Method in class signalprocesser.voronoi.representation.AbstractRepresentation
-
- createPoint(int, int) - Method in class signalprocesser.voronoi.representation.boundaryproblem.BoundaryProblemRepresentation
-
- createPoint(int, int) - Method in class signalprocesser.voronoi.representation.boundaryproblem.voronoicell.VoronoiCellRepresentation
-
- createPoint(int, int) - Method in class signalprocesser.voronoi.representation.simpletriangulation.SimpleTriangulationRepresentation
-
- createPoint(int, int) - Method in class signalprocesser.voronoi.representation.triangulation.TriangulationRepresentation
-
- createPoint(int, int) - Method in class signalprocesser.voronoi.representation.voronoicell.VoronoiCellRepresentation
-
- createSelectionFromMask(ImageProcessor, VPoint) - Static method in class bactimas.alg.MovieProcessor
-
- createShape(Area) - Static method in class signalprocesser.voronoi.shapegeneration.ShapeGeneration
-
- createShape(PathIterator) - Static method in class signalprocesser.voronoi.shapegeneration.ShapeGeneration
-
- createShape(ArrayList<VPoint>) - Static method in class signalprocesser.voronoi.shapegeneration.ShapeGeneration
-
- createShapeOutline(String, Rectangle, Font) - Static method in class signalprocesser.voronoi.shapegeneration.ShapeGeneration
-
Note: shape returning is not always exactly inside the bounds - for example,
if the text requested is a "g" - the foot of the g may over hang the lower
bounds.
- createSimpleTriangulationRepresentation() - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- createTestCase() - Method in class signalprocesser.voronoi.tools.TestSuite
-
- createTriangulationRepresentation() - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- createVoronoiCellRepresentation() - Static method in class signalprocesser.voronoi.representation.RepresentationFactory
-
- CSVIterator - Class in au.com.bytecode.opencsv
-
- CSVIterator(CSVReader) - Constructor for class au.com.bytecode.opencsv.CSVIterator
-
- CSVParser - Class in au.com.bytecode.opencsv
-
A very simple CSV parser released under a commercial-friendly license.
- CSVParser() - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVParser using a comma for the separator.
- CSVParser(char) - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVParser with supplied separator.
- CSVParser(char, char) - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVParser with supplied separator and quote char.
- CSVParser(char, char, char) - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVReader with supplied separator and quote char.
- CSVParser(char, char, char, boolean) - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVParser with supplied separator and quote char.
- CSVParser(char, char, char, boolean, boolean) - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVParser with supplied separator and quote char.
- CSVParser(char, char, char, boolean, boolean, boolean) - Constructor for class au.com.bytecode.opencsv.CSVParser
-
Constructs CSVParser with supplied separator and quote char.
- CSVParserBuilder - Class in au.com.bytecode.opencsv
-
Builder for creating a CSVParser.
- CSVParserBuilder() - Constructor for class au.com.bytecode.opencsv.CSVParserBuilder
-
- CSVReader - Class in au.com.bytecode.opencsv
-
A very simple CSV reader released under a commercial-friendly license.
- CSVReader(Reader) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader using a comma for the separator.
- CSVReader(Reader, char) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator.
- CSVReader(Reader, char, char) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReader(Reader, char, char, boolean) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator, quote char and quote handling
behavior.
- CSVReader(Reader, char, char, char) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReader(Reader, char, char, int) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReader(Reader, char, char, char, int) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReader(Reader, char, char, char, int, boolean) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReader(Reader, char, char, char, int, boolean, boolean) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReader(Reader, int, CSVParser) - Constructor for class au.com.bytecode.opencsv.CSVReader
-
Constructs CSVReader with supplied separator and quote char.
- CSVReaderBuilder - Class in au.com.bytecode.opencsv
-
Builder for creating a CSVReader.
- CsvToBean<T> - Class in au.com.bytecode.opencsv.bean
-
- CsvToBean() - Constructor for class au.com.bytecode.opencsv.bean.CsvToBean
-
- CSVWriter - Class in au.com.bytecode.opencsv
-
A very simple CSV writer released under a commercial-friendly license.
- CSVWriter(Writer) - Constructor for class au.com.bytecode.opencsv.CSVWriter
-
Constructs CSVWriter using a comma for the separator.
- CSVWriter(Writer, char) - Constructor for class au.com.bytecode.opencsv.CSVWriter
-
Constructs CSVWriter with supplied separator.
- CSVWriter(Writer, char, char) - Constructor for class au.com.bytecode.opencsv.CSVWriter
-
Constructs CSVWriter with supplied separator and quote char.
- CSVWriter(Writer, char, char, char) - Constructor for class au.com.bytecode.opencsv.CSVWriter
-
Constructs CSVWriter with supplied separator and quote char.
- CSVWriter(Writer, char, char, String) - Constructor for class au.com.bytecode.opencsv.CSVWriter
-
Constructs CSVWriter with supplied separator and quote char.
- CSVWriter(Writer, char, char, char, String) - Constructor for class au.com.bytecode.opencsv.CSVWriter
-
Constructs CSVWriter with supplied separator, quote char, escape char and line ending.
- CurrentExperiment - Class in bactimas.datamodel
-
- CurrentExperiment() - Constructor for class bactimas.datamodel.CurrentExperiment
-